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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4565371 chr7:33073538 T/C FKBP9L chr7:55748767-55780945:- 0.34 7.17 2.84E-12 Box Plot
THCA rs4568582 chr8:11160495 A/T SGK223 chr8:8175258-8244008:- -0.38 -7.29 1.31E-12 Box Plot
THCA rs4569145 chr13:82083737 G/A LHX1 chr17:35294084-35301912:+ 0.28 6.21 1.17E-9 Box Plot
THCA rs4569276 chr16:50142679 A/G NELF chr9:140342025-140353786:- -0.45 -6.1 2.13E-9 Box Plot
THCA rs4569858 chr5:151665747 T/C FILIP1L chr3:99548985-99833357:- -0.21 -5.92 6.0E-9 Box Plot
THCA rs4569880 chr5:46011475 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.17 2.84E-15 Box Plot
THCA rs4569881 chr5:46011769 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.17 2.84E-15 Box Plot
THCA rs4570161 chr8:10119629 G/T SGK223 chr8:8175258-8244008:- -0.35 -5.9 6.84E-9 Box Plot
THCA rs4571473 chr5:49671456 A/T LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs4573 chr6:26546808 A/G ZNF322B chr9:99957633-99961910:- 0.49 9.02 4.6E-18 Box Plot
THCA rs4573357 chr9:141057235 A/G TUBB4Q chr4:190903679-190906024:- -0.83 -16.11 5.74E-47 Box Plot
THCA rs4581914 chr2:101086096 C/T LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs4582610 chr8:10318343 T/C SGK223 chr8:8175258-8244008:- 0.35 6.62 9.45E-11 Box Plot
THCA rs4589783 chr2:101083567 T/A LOC285359 chr3:101431278-101432259:+ 0.31 6.01 3.63E-9 Box Plot
THCA rs4591839 chr6:26597924 C/T ZNF322B chr9:99957633-99961910:- 0.75 15.65 7.51E-45 Box Plot